![]() ![]() Removes non-protein characters from sequence text including text marks, numbers, and spaces.įormat protein sequence with specific group size, line length and adds numbering. Online tool to generate a random protein sequence.Įxtract each of the protein translations described in a Genbank file.Įxtract each of the protein translations described in an EMBL file.Ĭonvert three letter translations to single letter translations.Ĭonvert single letter translations to three letter translations. Locate patterns and motifs along the polypeptide sequence of a protein.Ĭalculate the number of occurrences of each residue in a polypeptide sequence. Removes non-DNA characters from text including text marks, numbers, and spaces.įormat DNA sequence output with selected line length, segments, and base numbering.Īssemble multiple FATA sequences in a single sequence.Ĭalculate the theoretical isoelectric point of a protein sequence.Ĭalculate the GRAVY (grand average of hydropathy) value for a protein sequence.Īlign two protein sequences and color the resulting global alignment. + The pH of an electrophoretic gel is determined by the buffer used for that gel. Online tool to generate random sequences.Ĭonvert a Genbank-formatted DNA sequence in FASTA format.Ĭonvert an EMBL-formatted DNA sequence in FASTA format.Įxtract sequence features from a Genbank-formatted DNA sequence.Įxtract sequence features from an EMBL-formatted DNA sequence. For an amino acid with only one amine and one carboxyl group, the pI can be calculated from the mean of the pKas of this molecule. Locate DNA patterns and motifs along the two strands of a DNA sequence.ĭetect potential CpG island regions using a 200 bp window according to the method of Gardiner-Garden and Frommer (1987).ĭNA Stats analyzes occurrences and frequency of each nucleotide and dinulceotides in the sequence. Generate the PCR product from a DNA sequence and 2 primers.ĭetermine standard primer properties, including melting temperature, percent GC content, and PCR suitability. Summary of number and positions of commonly used restriction endonuclease cut sites.ĭetermine the DNA sequences resulting from a restriction digest.Ĭreate a sequence map showing annealing positions of PCR primers, protein translation, and common restriction sites. ![]() ![]() Online tool with varied graphical output options.Ĭreate a sequence map showing the positions of restriction endonuclease cut sites. Translate DNA in varied formats (GCG, FASTA, EMBL, GenBank, PIR, NBRF or Phylip). Search for open reading frames (ORFs) in the provided DNA sequences. Translate one or more provided DNA sequence in the desired reading frames.īack Translate generates a DNA sequence representing the most likely non-degenerate coding sequence from a protein sequence and draw the corresponding translation map.Ĭalculate the number and frequency of each codon. Generate a textual representation of DNA translation in varied reading frames. Calculate the molecular weight of DNA single-stranded sequences are counted with a 5'-P.Ĭonvert a DNA sequence into its reverse, complement, or reverse-complement.Īlign two DNA sequences and color the resulting global alignment. ![]()
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